Insertion junction: CLIP2.066917_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066917
Chromosome:chromosome 10
Location:4077803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448150 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGTTCCGCAGCCCAAAGCGTGTCGCACACACAAAGCCATTACAATTT
Internal bar code:TTGTGGCTGGGTAGAGTCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2366
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTTCTGTGGCAGTACAT
Suggested primer 2:AGATTGCCTAACTTGCCCCC