Insertion junction: CLIP2.066917_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066917
Chromosome:chromosome 10
Location:4077810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448150 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTGGGGGCGCCGCTGAGGCTCCGAGCAACTGTACTACGAGGACGTGAC
Internal bar code:CGCCATTGATGTAGCTACTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3193
LEAP-Seq percent confirming:38.9262
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:91
LEAP-Seq n unique pos:149

Suggested primers for confirmation by PCR

Suggested primer 1:AGATTGCCTAACTTGCCCCC
Suggested primer 2:CCGGTTCTGTGGCAGTACAT