Insertion junction: CLIP2.066923_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066923
Chromosome:chromosome 3
Location:3780325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169550 AOX2 Alternative oxidase; (1 of 2) PTHR31803:SF3 - ALTERNATIVE OXIDASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGTGCCGGGCATGGTGGCCGGAGTCCTGCGTCACCTTAAGTCCCTGC
Internal bar code:AATATTCCTCGTCGACCACATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4165
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTTGCAGTAGGGTGTGG
Suggested primer 2:GGACCTTCGACAAGCTGACA