Insertion junction: CLIP2.066927_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066927
Chromosome:chromosome 12
Location:1587602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487150 PGM20 (1 of 2) PTHR23029//PTHR23029:SF24 - PHOSPHOGLYCERATE MUTASE // SUBFAMILY NOT NAMED; Putative phosphoglycerate mutase 3'UTR
Cre12.g487200 (1 of 5) IPR001680//IPR011047//IPR017986//IPR020472 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGGGGGGCTGTGGCCCAGCGCGGGCCTCACGCTGACTGCGGGGGCA
Internal bar code:AGCTCATAAATGAGCGACAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2585
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTCTGTTCCCTACCTT
Suggested primer 2:ACTGGCTGTGGCAAGATACC