Insertion junction: CLIP2.066928_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066928
Chromosome:chromosome 2
Location:494818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076350 ATPVB1,ATPVB Vacuolar ATP synthase subunit B; (1 of 1) K02147 - V-type H+-transporting ATPase subunit B (ATPeV1B, ATP6B) 5'UTR
Cre02.g076400 VPS25 Subunit of ESCRT-II complex; (1 of 1) K12189 - ESCRT-II complex subunit VPS25 (VPS25, EAP20) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGAAGCCACGTTGCCGGTGTGTTATGCTTTGCTAGGAGGTTAGGGTG
Internal bar code:GCTCCAAAGTCGCCACTGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5637
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATATCACGCGAGACAGG
Suggested primer 2:TGTGTGTCCCCACTTGCTTT