Insertion junction: CLIP2.066931_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066931
Chromosome:chromosome 3
Location:293765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144444 (1 of 1) IPR022416 - Prion/Doppel protein, beta-ribbon domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGCCGACGGAGTTTCAGTTTATTGTCTTGTAACTGTCTGGAGGGCAC
Internal bar code:GGTAAGTTGCCCGAGCTTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2933
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGAAGGAGGAGGAGGAG
Suggested primer 2:AAACCCTGGCTAGCGTGTAC