Insertion junction: CLIP2.066931_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066931
Chromosome:chromosome 3
Location:293767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144444 (1 of 1) IPR022416 - Prion/Doppel protein, beta-ribbon domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTGGACATGACGGATGGGTAACCGAATGACGAACACATGACCCTGAA
Internal bar code:GGTAAGTTGCCCGAGCTTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1883
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCCTGGCTAGCGTGTAC
Suggested primer 2:AGCAGAAGGAGGAGGAGGAG