Insertion junction: CLIP2.066942_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066942
Chromosome:chromosome 10
Location:892380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801110 (1 of 39) IPR001190 - SRCR domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGGCGCGTAGGCGGGCAGGTGCACACCACTCACGGTGGGCGGGCAGG
Internal bar code:CGTTGGGAAGTCACTCCTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1214
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTCTGGGGCCCTAAAC
Suggested primer 2:CGGTGTGGTCTGTTTCGGTA