Insertion junction: CLIP2.066945_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066945
Chromosome:chromosome 6
Location:7211237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298750 AOT4 (1 of 9) PF01490 - Transmembrane amino acid transporter protein (Aa_trans); Amino acid transporter 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCAGGTACACGTGAGGAGGTGTGACTAATGAACAACGGATCAGGCAG
Internal bar code:GCACTCAAGGGGAACCGAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1435
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCAAACGGGTTTTCCTC
Suggested primer 2:CTGCAGTCGTACCTCTAGCG