Insertion junction: CLIP2.066948_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066948
Chromosome:chromosome 10
Location:1926099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g431700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGCCAAGAAAGTTATGCTCCTTTCGCTGCATCGGGACCTGCCGGGAC
Internal bar code:CGAGCCTAGCCCCCCCCCTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1174
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCAGTGCAAGGCTGAT
Suggested primer 2:CAGACCTCGGAGTAGGGGAA