Insertion junction: CLIP2.066949_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066949
Chromosome:chromosome 6
Location:842691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g255600 EZY24,EZY1,EZY1A Copy A in the EZY1 tandem gene cluster 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCGCTTGCGCGCAGGGGTGCCTGCGTGCGCGACCTTTTGCGCGCCCG
Internal bar code:CGAGAGGACGTTTCTTACAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1083
LEAP-Seq percent confirming:3.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTGAATTCCGTGCAAGC
Suggested primer 2:CTTTGGTTTTGGGGGCATGG