Insertion junction: CLIP2.066956_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066956
Chromosome:chromosome 3
Location:6115616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190550 (1 of 1) PF08638 - Mediator complex subunit MED14 (Med14) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTATACTGAACTGTCCACTAAAGAAGTAAGCAGAAAGCCAGGATAAA
Internal bar code:GGGAACGAGTGGTTGAGGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1619
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACGGTGAATTAATCCGC
Suggested primer 2:TGGGCCGGAGCAAATTATGT