Insertion junction: CLIP2.066960_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066960
Chromosome:chromosome 9
Location:3882845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397993 FAP201 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype; Leucine Rich Repeat Flagellar Associated Protein 201 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACGATGGGGAAGCCGGGACGGGGCCCTGCCCGGGGCGGAAGCGGAACT
Internal bar code:TGAACACTAGCAACCCATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:822
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCAGAGCTAACCACCCAC
Suggested primer 2:GCTGAGAGCTAGGAGGCATG