Insertion junction: CLIP2.066962_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066962
Chromosome:chromosome 2
Location:4940812
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110150 (1 of 1) PF00651//PF03110//PF07707 - BTB/POZ domain (BTB) // SBP domain (SBP) // BTB And C-terminal Kelch (BACK) 3'UTR
Cre02.g110200 THO1 Oligoendopeptidase; (1 of 3) 3.4.24.59 - Mitochondrial intermediate peptidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAAAGCCCCAAAGGTGGTAGCCCCTCCAGAGAAGAGTGGACTGAGGCC
Internal bar code:CAGAGAGCGACAGGTGTGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2831
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCTCGAAGTCCGTAGC
Suggested primer 2:CAAGACTTGGTTTGGTGGCG