Insertion junction: CLIP2.066967_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066967
Chromosome:chromosome 9
Location:3374646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395621 DIV122 (1 of 1) PTHR10933:SF9 - LD07294P 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTCCAAACAGACACCGGCGCCAGCCCGACCTCTCCCGCGCGGGAGCG
Internal bar code:TGGCGGCATCCGCCACGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2195
LEAP-Seq percent confirming:31.5789
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTGATACCTGGCAGCA
Suggested primer 2:GAGGAGGACAAGGTCAAGGC