Insertion junction: CLIP2.066971_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066971
Chromosome:chromosome 3
Location:6205412
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g191350 (1 of 1) K05642 - ATP-binding cassette, subfamily A (ABC1), member 2 (ABCA2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTAAGCGTGATGGCCCGGCGATGCCTGCGCTTGCGACACCGGTGTTGT
Internal bar code:ATTGATGAAAAGGAGAGTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:228
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATGTGCAGGGACAGCTC
Suggested primer 2:GCGCGATTTTAGCTTGGAGG