Insertion junction: CLIP2.066973_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066973
Chromosome:chromosome 9
Location:4011215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801041 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTCTCGACCCACATGCCCGGTATCGGCTGCAACCACCGGTGTGTGGGA
Internal bar code:CCGGTACCCTGACTGGCATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2565
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCAGCCCTCATCTTGAA
Suggested primer 2:TCAAACAACCGCCTGCATTG