Insertion junction: CLIP2.066979_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066979
Chromosome:chromosome 1
Location:5750236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041150 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGGTTGGGATGTTGGGGTGCGACATGTCTCGCCTGACCAGAACGTGC
Internal bar code:AACTCGTACAAAATTTAGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1556
LEAP-Seq percent confirming:78.125
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTCAACATATGCAGGTG
Suggested primer 2:ACGTGCCATTTGGACGTTTG