Insertion junction: CLIP2.066979_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066979
Chromosome:chromosome 1
Location:5750238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041150 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGTGTTGACGGGCGGTAGCCCTTCGTCTTCTGGTAGGCTCCTGATGT
Internal bar code:AACTCGTACAAAATTTAGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3161
LEAP-Seq percent confirming:86.076
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGCCATTTGGACGTTTG
Suggested primer 2:CGCGTCAACATATGCAGGTG