Insertion junction: CLIP2.066980_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066980
Chromosome:chromosome 11
Location:2839176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801305 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCAGCCGAGACTCGACCACACTCGCACTGTGCCCGCCCCTCCCCCG
Internal bar code:CGGCGAGATACCATTCATTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4458
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGTATGATGACGCCGCC
Suggested primer 2:TCGTGTCTCCTGCTGTTGTC