Insertion junction: CLIP2.066984_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066984
Chromosome:chromosome 11
Location:531012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467597 (1 of 1) IPR000104//IPR003439//IPR003593//IPR013525//IPR013581//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // Plant PDR ABC transporter associated // P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATCGACGCACTTGTTCAATACAGCCATCCAAGAAACTGCCGGGCTCT
Internal bar code:GGTGAAAGAAAAGGTGATTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1493
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGACGAGGGGTTTTGC
Suggested primer 2:GGTGGCGAAGGAGTTGTGTA