Insertion junction: CLIP2.066992_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066992
Chromosome:chromosome 17
Location:281940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697850 (1 of 226) IPR012337 - Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAATCCGGCGCCAGCTGAACCCACCCCCAAATCCCCATGCATGCCCA
Internal bar code:CGCGCGCGTTTTGTGCAAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5297
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGAACCACTCGCACTCAG
Suggested primer 2:CCAGGTTGTGCGAAACAGTG