Insertion junction: CLIP2.066992_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066992
Chromosome:chromosome 17
Location:281942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697850 (1 of 226) IPR012337 - Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAACTAGACACCGCTCCCGACTAGGGGGCAAGTTGGCATGCGGAGGTGG
Internal bar code:CGCGCGCGTTTTGTGCAAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2199
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGTTGTGCGAAACAGTG
Suggested primer 2:ACTGAACCACTCGCACTCAG