Insertion junction: CLIP2.067002_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067002
Chromosome:chromosome 10
Location:2755840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438200 (1 of 2) IPR001841//IPR001876//IPR016024 - Zinc finger, RING-type // Zinc finger, RanBP2-type // Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGTGATAGCTTTCCAAGAGGCGGGAGCCTGGGATCACTTCTGAGACTG
Internal bar code:CAGCAAGTACGTATAGGCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1712
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTTCTGCACGGGTTCTG
Suggested primer 2:CGTGTGGCGCGTATAAACTG