Insertion junction: CLIP2.067002_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067002
Chromosome:chromosome 10
Location:2755850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438200 (1 of 2) IPR001841//IPR001876//IPR016024 - Zinc finger, RING-type // Zinc finger, RanBP2-type // Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATCACGCTAGGTGGTGAAGACCGGTCATTCAGCGAAAGCCCTTCTATC
Internal bar code:GCATTAATGCCTGTAGTCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5812
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGGCGCGTATAAACTG
Suggested primer 2:TAGCTTCTGCACGGGTTCTG