Insertion junction: CLIP2.067004_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067004
Chromosome:chromosome 5
Location:2550465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGTACGCCACCGCATCCTTCCCCCGTCCTCAAAGCGCCACGCGCCAG
Internal bar code:GATTACACGACCGGATTTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2300
LEAP-Seq percent confirming:97.8261
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGCTGCTGTCATTGGC
Suggested primer 2:TGTAGCCCAGTAGCCCTCAT