Insertion junction: CLIP2.067008_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067008
Chromosome:chromosome 6
Location:1162877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258100 (1 of 2) PTHR12436//PTHR12436:SF4 - 80 KDA MCM3-ASSOCIATED PROTEIN // LEUKOCYTE RECEPTOR CLUSTER MEMBER 8 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCGCGGCGCCGAATCTGAGAGCCCCGGCGAAATGGCTCCAAGCCCT
Internal bar code:TAAGCTAGCATGTACCATGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1273
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCGCAAGCAGACGAGTT
Suggested primer 2:GGTCGTAGCCGTAATACCCG