Insertion junction: CLIP2.067010_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067010
Chromosome:chromosome 1
Location:3972868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025983 protein of unknown function with DUF1399 domain; (1 of 11) PF07173 - Protein of unknown function (DUF1399) (DUF1399) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGCTGACTGGCAGGCGAGACGCAGGGCGGGCCTCACGCCAATACCG
Internal bar code:TTCTGATGTTGGCTTCGTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3307
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGTCGCTAACTATGGGT
Suggested primer 2:CAGGCCAACGCAACGTAAAA