Insertion junction: CLIP2.067028_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067028
Chromosome:chromosome 5
Location:841151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246100 (1 of 1) IPR019887 - Transcription regulator AsnC-type, C-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCACAGCGCAAGTCTGACACGCGGGGCCCAGCGGCGCTCTCTCAACCA
Internal bar code:ACATGCGTGGAATGTATCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:768
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTGCTTGTACGCTGGCA
Suggested primer 2:CCAGAAGCGCATCCTCCTAG