Insertion junction: CLIP2.067030_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067030
Chromosome:chromosome 9
Location:3066301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393913 (1 of 1) 3.5.4.16 - GTP cyclohydrolase I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGTCGTATGCAATAGGGCATGGGCAGAGGTGATCGAGTGTGTCGCTT
Internal bar code:GCACACACAGTACGAGGTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:670
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTAGGCAGTGACAGTGG
Suggested primer 2:CGGTGAGCTACTGATCGCAT