Insertion junction: CLIP2.067032_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067032
Chromosome:chromosome 4
Location:3844734
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g229948 (1 of 2) 1.3.1.89 - tRNA-dihydrouridine(47) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCGGGGTTGAGAGAGCCGAGCCAGGTGAGCGAGGCGTGTCGACATGCA
Internal bar code:TGATGTATATAGCTACTCCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:196
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTACTGCTGTTCCCAAG
Suggested primer 2:CGAATCCAATGCAAGCGAGG