Insertion junction: CLIP2.067038_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067038
Chromosome:chromosome 9
Location:3053455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393802 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAAAAGAAGTGTAAACATTCCCAACTCTAGTCGAGAAAGTCGAGCCGC
Internal bar code:ATTTATGGGTTCGACGGGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGAAAGTTGTGTGTCCG
Suggested primer 2:CAATAAGCCACGTCCCCTGT