Insertion junction: CLIP2.067038_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067038
Chromosome:chromosome 9
Location:3053468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393802 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTCTTTTGACCGGCCGGCCAGACAGGTCCGCAGCGGTTGCTGCAAGC
Internal bar code:ATTTATGGGTTCGACGGGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3893
LEAP-Seq percent confirming:56.9892
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CAATAAGCCACGTCCCCTGT
Suggested primer 2:CTGCGAAAGTTGTGTGTCCG