Insertion junction: CLIP2.067040_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067040
Chromosome:chromosome 12
Location:2212591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508900 MAPK6 (1 of 3) K04371 - mitogen-activated protein kinase 1/3 (MAPK1_3); Mitogen-Activated Protein Kinase 6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTAATCACCATCCGACTCTAGGTCTGAGGATAGCCCGTCCGTTATCG
Internal bar code:TTAAAAGGGGACGTTTTACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:385
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAATGTCTCCGCAATCGT
Suggested primer 2:GCCAGCACTTGTGTTGAGTG