Insertion junction: CLIP2.067042_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067042
Chromosome:chromosome 3
Location:359413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144667 CLPS4,CLPT4 (1 of 2) IPR023150 - Double Clp-N motif; Additional subunit of chloroplast ClpP complex 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGCAAAACAATTAACAAAGTAGGGCAGGCCAGCCCTAGTTGCTCAC
Internal bar code:GTCAAGCCTATATCGTGATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1666
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTCCTCGCTGTCGCTAG
Suggested primer 2:TTCAGGATCTTTGCTGCCGT