Insertion junction: CLIP2.067042_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067042
Chromosome:chromosome 3
Location:359422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144667 CLPS4,CLPT4 (1 of 2) IPR023150 - Double Clp-N motif; Additional subunit of chloroplast ClpP complex 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCGACTGCTTAGCCCAGATCATCTGAATTTGCGTCAAAAGCACAGCT
Internal bar code:GTCAAGCCTATATCGTGATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2137
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGGATCTTTGCTGCCGT
Suggested primer 2:CTCTTCCTCGCTGTCGCTAG