Insertion junction: CLIP2.067043_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067043
Chromosome:chromosome 2
Location:6982524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389430 TSF3 (1 of 1) PTHR11538:SF40 - PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT; Phenylalanyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATAACTGCAGTTTGGTGGCGTGTGGCTGGAGGTGTTGGCGATGGAGT
Internal bar code:GCTGGACTAACATTGTTACCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1864
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAAAGTTGTGCAGCTCAT
Suggested primer 2:ACACGAGTTCGGAAGCATGT