Insertion junction: CLIP2.067048_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067048
Chromosome:chromosome 4
Location:1964017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218850 RNP (1 of 1) K14846 - ribosome production factor 1 (RPF1); Putative small nucleolar ribonucleoprotein U3 protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGTTCTACCCAGTGAGTTCTACCTCATTATGTGTTCCTGCCCCTGCCT
Internal bar code:GTGGATTGCGTTCTGTTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:980
LEAP-Seq percent confirming:93.4783
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GACACTAGTCATCTGGCGGG
Suggested primer 2:AATATGCAGGCCCTGGCTTT