Insertion junction: CLIP2.067049_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067049
Chromosome:chromosome 3
Location:1303165
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g150251 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGTGGTGCAGGAGGATTCGGGGAGGGCGGATGGGGAGAAGGTTCCGG
Internal bar code:ATTACTCGAGAGTGTGGCGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCAGTCCCACCTCAAC
Suggested primer 2:AGTCGTAATTGACAGCGGCA