Insertion junction: CLIP2.067050_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067050
Chromosome:chromosome 1
Location:2633716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015750 (1 of 2) PF07978 - NIPSNAP (NIPSNAP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCCAGATCCTAGGTCAGCTTCGCCCCCCGTGATTAGGGTCCGAATA
Internal bar code:ACTCCGTATTTGCAGTGCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1244
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTCCATCTGCTCTCTGA
Suggested primer 2:GTTTGTTTGCAGGGCTCCAG