Insertion junction: CLIP2.067076_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067076
Chromosome:chromosome 3
Location:818657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146347 (1 of 3) PTHR11220//PTHR11220:SF1 - HEME-BINDING PROTEIN-RELATED // HEME-BINDING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACAGTCGGTAGCAGCTGCTAGGTCGGTGGGTGGTACGCTCGGGAGGG
Internal bar code:GCTTATTTCGGTATTATTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGCTAATGATTGCTGTG
Suggested primer 2:TGTTACACAGGTCGACGTGG