Insertion junction: CLIP2.067085_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067085
Chromosome:chromosome 4
Location:3283974
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g226811 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATATGTTACTAGTAGTCTTCACGCCGCCAGCTCCGAGCACCCACATGC
Internal bar code:GTACCTAGCTGTTGTATTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1141
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCCGATGGAAGGGAAGGA
Suggested primer 2:ATTACAGCGTGTGTGCCAGA