Insertion junction: CLIP2.067087_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067087
Chromosome:chromosome 1
Location:4880496
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g034000 IPB1 Importin beta; (1 of 1) K14293 - importin subunit beta-1 (KPNB1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTGGACGCGCGGCTCCGTCGCCCAGCGCTGCTCGGCTTCGATAAAAA
Internal bar code:GGGGGGCACCAGTAGAATGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:860
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAATCGTCCTCGCTACAA
Suggested primer 2:CGACGTACATTCGACGCAAC