Insertion junction: CLIP2.067114_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067114
Chromosome:chromosome 13
Location:1124551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569400 TAUD1 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATCCGCATTGACTACAAAATAGCTAAAATGTCTTCTGAGATCCCCAC
Internal bar code:GTGTCGTGGGCCCCGCCTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4210
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGAGAAGGCCTGGGTAG
Suggested primer 2:TCCAGCGTCCATTTCTGCAT