Insertion junction: CLIP2.067121_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067121
Chromosome:chromosome 2
Location:3108539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096150 MSD1,SODA (1 of 5) K04564 - superoxide dismutase, Fe-Mn family (SOD2); Mn superoxide dismutase 3'UTR
Cre02.g096200 (1 of 1) K06990 - uncharacterized protein (K06990) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGCCCACATGCCACCATCACGGCGCATGGCCATGCCGCATTGCCGCC
Internal bar code:TGATAGCTCTGCCGTCCGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1896
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCGTCCATGAGAGATGG
Suggested primer 2:CGATCTGCAAGCGCTGTAAC