Insertion junction: CLIP2.067131_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067131
Chromosome:chromosome 12
Location:6237071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAATCGAAGTCACGGCAACAGTGCCTGGTTTCCTCGACGGCCACAGTT
Internal bar code:TGGTCTCGCTAGGACGCACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1674
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGCCACCTCCTTGTTAT
Suggested primer 2:GTCGGGGTTACAGCCATCAA