Insertion junction: CLIP2.067139_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067139
Chromosome:chromosome 3
Location:3755598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169350 (1 of 3) IPR007860 - DNA mismatch repair protein MutS, connector domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATTAATTTATCAGGCAGTCAAGTATATGAGCCTAGGCTCCACGCGGT
Internal bar code:GATCTTCTGGGCATACTATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3830
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAATCAACTCATCGCGGC
Suggested primer 2:AGCTTCGAACAGTCACAGGG