Insertion junction: CLIP2.067161_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067161
Chromosome:chromosome 6
Location:8422620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308200 (1 of 2) K09531 - DnaJ homolog subfamily C member 11 (DNAJC11) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATTGTGGCCATGAGGCTGCTGATCACGTACCGGGGCAAAGCCCGGGT
Internal bar code:CAAGGTGCAATATCTGCCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2214
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGGGGCAGTGCATTCAG
Suggested primer 2:CACAGCTGGCGATAGAGAGG