Insertion junction: CLIP2.067167_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067167
Chromosome:chromosome 7
Location:2715194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331114 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATTGTCATGTGCAAGTGCTGTGGTTGAAGAGTGTCTGATGACCACTT
Internal bar code:AAATGTGGAGTGAGGATCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1405
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGCCATTTCACACTGCG
Suggested primer 2:GGAACTGTTTGCATGGCGTT