Insertion junction: CLIP2.067170_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067170
Chromosome:chromosome 13
Location:4299080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592400 LCI21 Low-CO2-inducible protein 21 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACGCGCATTGTTACGTTCTGCGAGGATGTGTCAGGGGGGGGGTACGA
Internal bar code:TCGAGGCGTGCAGAAGGAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1287
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTTCAGGGTCGGTCGTC
Suggested primer 2:GCCTTTCAATGGCTGTGGTG